Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm14909-201ENSMUST00000117853 351 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm12423-201ENSMUST00000118334 135 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm13887-201ENSMUST00000119009 344 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm12752-201ENSMUST00000121657 811 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm11197-201ENSMUST00000145158 839 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm24690-201ENSMUST00000157759 97 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm5066-201ENSMUST00000188479 822 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Ighv6-2-201ENSMUST00000192430 295 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm33601-201ENSMUST00000210001 961 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm18924-201ENSMUST00000211929 316 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Olfr151-202ENSMUST00000221099 929 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Gm26163-201ENSMUST00000083792 178 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 BC055308-201ENSMUST00000193380 2538 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.75□□□□□ -1.65
Lima1Q9ERG0 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Lima1Q9ERG0 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm23274-201ENSMUST00000104056 130 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Mir466i-201ENSMUST00000116924 121 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm13537-201ENSMUST00000120467 267 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm14369-201ENSMUST00000121355 285 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm22725-201ENSMUST00000158092 110 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm24860-201ENSMUST00000158457 276 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm38166-201ENSMUST00000191660 471 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm37355-201ENSMUST00000193345 606 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm43304-201ENSMUST00000196803 326 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm32453-201ENSMUST00000204183 456 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm44523-201ENSMUST00000205616 417 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm6056-201ENSMUST00000221253 488 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm7768-201ENSMUST00000222988 597 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Clec2j-201ENSMUST00000032517 515 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm4822-201ENSMUST00000077551 479 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Olfr1143-201ENSMUST00000090708 945 ntBASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Lima1Q9ERG0 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms