Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Neat1-201ENSMUST00000173672 20771 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm13484-201ENSMUST00000120738 412 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm24931-201ENSMUST00000158324 107 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Mir3090-201ENSMUST00000175597 87 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm9457-201ENSMUST00000180176 372 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm18802-201ENSMUST00000186270 888 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm43919-201ENSMUST00000204303 364 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Chmp2aQ9DB34 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm24578-201ENSMUST00000103970 129 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm16394-201ENSMUST00000117289 675 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm15022-201ENSMUST00000122074 746 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm22343-201ENSMUST00000122648 286 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm24371-201ENSMUST00000122662 267 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm23115-201ENSMUST00000158480 108 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm17086-201ENSMUST00000171346 484 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm37682-201ENSMUST00000191776 522 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Chmp2aQ9DB34 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm13195-201ENSMUST00000117229 261 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm15670-201ENSMUST00000117740 447 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm15297-201ENSMUST00000117795 290 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm11196-201ENSMUST00000119052 395 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm12685-201ENSMUST00000121702 214 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm23046-201ENSMUST00000158369 284 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm24949-201ENSMUST00000183609 215 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm28186-201ENSMUST00000187447 679 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm28976-201ENSMUST00000188070 144 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm29201-201ENSMUST00000189120 431 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Gm3912-203ENSMUST00000211024 367 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.04□□□□□ -1.6
Chmp2aQ9DB34 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms