Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm23233-201ENSMUST00000157301 137 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm23280-201ENSMUST00000157905 139 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm22724-201ENSMUST00000158091 127 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm18343-201ENSMUST00000172802 604 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm18354-201ENSMUST00000173515 1068 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm24957-201ENSMUST00000179604 132 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm37609-201ENSMUST00000191778 678 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm2040-201ENSMUST00000202979 289 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm19599-201ENSMUST00000218898 358 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Mir143-201ENSMUST00000083511 63 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm37965-201ENSMUST00000195304 1362 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm6913-201ENSMUST00000100019 348 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm26377-201ENSMUST00000102184 108 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm23839-201ENSMUST00000116957 109 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm11774-201ENSMUST00000118601 293 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm13363-201ENSMUST00000122008 522 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm25291-201ENSMUST00000122795 144 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm25246-201ENSMUST00000175476 69 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm1972-201ENSMUST00000181606 964 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm27210-201ENSMUST00000184263 402 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm28190-201ENSMUST00000189766 722 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Igkv13-82-201ENSMUST00000200308 346 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm46223-201ENSMUST00000215196 675 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 AC159380.1-201ENSMUST00000218096 121 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.92□□□□□ -1.46
Ddx56Q9D0R4 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Ddx56Q9D0R4 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms