Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Mir331-201ENSMUST00000083673 96 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Use1Q9CQ56 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.65□□□□□ -1.66
Use1Q9CQ56 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.65□□□□□ -1.66
Use1Q9CQ56 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.65□□□□□ -1.66
Use1Q9CQ56 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Use1Q9CQ56 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Use1Q9CQ56 Gm14836-201ENSMUST00000118567 471 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm15390-201ENSMUST00000120323 738 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm22084-201ENSMUST00000157585 105 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm24931-201ENSMUST00000158324 107 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm8837-201ENSMUST00000161037 1107 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm5139-201ENSMUST00000175943 249 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm24300-201ENSMUST00000177809 109 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm24017-201ENSMUST00000178726 109 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm23952-201ENSMUST00000179380 109 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Use1Q9CQ56 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm28943-201ENSMUST00000186187 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm28736-201ENSMUST00000186257 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm28975-201ENSMUST00000186412 686 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm29401-201ENSMUST00000186690 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm29178-204ENSMUST00000186784 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm28589-201ENSMUST00000186991 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm28936-201ENSMUST00000187153 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm29121-201ENSMUST00000187611 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm28243-201ENSMUST00000187801 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm28844-202ENSMUST00000187977 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm29058-201ENSMUST00000189510 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm29624-201ENSMUST00000190018 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm28780-201ENSMUST00000190223 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm28969-211ENSMUST00000190992 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm28990-207ENSMUST00000191219 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm36468-201ENSMUST00000192119 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm37421-201ENSMUST00000193088 132 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm31572-201ENSMUST00000193341 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm37187-201ENSMUST00000193425 341 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm30175-201ENSMUST00000194173 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm18843-201ENSMUST00000194982 719 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm30858-201ENSMUST00000195516 615 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm18468-201ENSMUST00000207321 369 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm18470-201ENSMUST00000207467 420 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm18465-201ENSMUST00000207468 369 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm18464-201ENSMUST00000207803 420 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm18458-201ENSMUST00000207908 369 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm18461-201ENSMUST00000208421 420 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Use1Q9CQ56 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.65□□□□□ -1.67
Use1Q9CQ56 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.64□□□□□ -1.67
Use1Q9CQ56 Gm15357-201ENSMUST00000119160 285 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms