Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm23542-201ENSMUST00000158208 96 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm24363-201ENSMUST00000158440 311 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm15257-201ENSMUST00000177680 883 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm15252-201ENSMUST00000177750 883 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm23269-201ENSMUST00000178701 107 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm15260-201ENSMUST00000179402 883 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm9556-201ENSMUST00000182938 940 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm27964-201ENSMUST00000185195 62 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm37135-201ENSMUST00000192652 534 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm44409-201ENSMUST00000198810 166 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm44163-201ENSMUST00000205140 475 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 AC154328.1-201ENSMUST00000225875 307 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Gm26442-201ENSMUST00000082588 153 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Mir7b-201ENSMUST00000083557 111 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim11Q99PQ2 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm28322-201ENSMUST00000185627 1475 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm12939-201ENSMUST00000117303 165 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm11821-201ENSMUST00000117335 979 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm15078-201ENSMUST00000118371 782 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm15765-201ENSMUST00000118407 910 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm11869-201ENSMUST00000118701 329 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm13627-201ENSMUST00000119700 706 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm13493-201ENSMUST00000120318 493 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm13555-201ENSMUST00000121668 319 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm15696-201ENSMUST00000121730 445 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Mir1953-201ENSMUST00000157866 89 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm5886-202ENSMUST00000203957 522 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 AC161520.1-201ENSMUST00000210954 939 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm7751-201ENSMUST00000212868 709 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 AC160114.1-201ENSMUST00000221930 365 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 AC159263.3-201ENSMUST00000223434 460 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Zfp429-203ENSMUST00000224684 524 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 AC151907.1-201ENSMUST00000228812 412 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Gm3665-201ENSMUST00000177214 2461 ntBASIC6.92□□□□□ -1.3
Trim11Q99PQ2 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms