Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 AC163032.1-201ENSMUST00000220671 2970 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm24931-201ENSMUST00000158324 107 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm38270-201ENSMUST00000192721 407 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm42892-201ENSMUST00000196227 3973 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm45112-201ENSMUST00000208576 5125 ntBASIC4.66□□□□□ -1.66
Cdh23Q99PF4 Gm37833-201ENSMUST00000194342 3256 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm24774-201ENSMUST00000157384 134 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm19243-201ENSMUST00000198592 269 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm43436-201ENSMUST00000199308 147 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm43084-201ENSMUST00000200696 947 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 AC112972.2-201ENSMUST00000228702 2210 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm37566-201ENSMUST00000192363 4355 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm25386-201ENSMUST00000157814 288 ntBASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Cdh23Q99PF4 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 CT025675.1-201ENSMUST00000228171 1567 ntBASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Gm43710-201ENSMUST00000199583 452 ntBASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Gm3338-201ENSMUST00000220982 269 ntBASIC4.65□□□□□ -1.67
Cdh23Q99PF4 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Cdh23Q99PF4 AC122024.1-201ENSMUST00000219276 4850 ntBASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Synpr-207ENSMUST00000223583 3362 ntBASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Gm13172-201ENSMUST00000118685 256 ntBASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Gm11829-201ENSMUST00000121003 282 ntBASIC4.64□□□□□ -1.67
Cdh23Q99PF4 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Gm24503-201ENSMUST00000158454 135 ntBASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.64□□□□□ -1.67
Cdh23Q99PF4 Gm37791-201ENSMUST00000195081 286 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms