Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Msh4Q99MT2 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msh4Q99MT2 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm12074-201ENSMUST00000120189 219 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm16053-201ENSMUST00000120511 188 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm26489-201ENSMUST00000157880 264 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm26352-201ENSMUST00000158223 125 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm23069-201ENSMUST00000158240 311 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm8993-201ENSMUST00000182182 983 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm38231-201ENSMUST00000192030 347 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm6543-201ENSMUST00000197353 808 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm5309-201ENSMUST00000197416 677 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 AL929265.1-201ENSMUST00000213427 125 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 AC132384.13-201ENSMUST00000219556 1159 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 AC131068.1-201ENSMUST00000226891 482 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm7204-201ENSMUST00000062591 600 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm23927-201ENSMUST00000082466 215 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.2□□□□□ -1.58
Msh4Q99MT2 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msh4Q99MT2 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Msh4Q99MT2 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Abcc2-202ENSMUST00000099413 1926 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msh4Q99MT2 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm14931-201ENSMUST00000111079 253 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm6134-201ENSMUST00000117265 171 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm12230-201ENSMUST00000118301 454 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm14985-201ENSMUST00000118693 786 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm15490-201ENSMUST00000119894 387 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm13341-201ENSMUST00000120780 672 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm15152-201ENSMUST00000121540 394 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm23211-201ENSMUST00000122717 308 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm25430-201ENSMUST00000157614 289 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm22693-201ENSMUST00000175049 442 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm22411-201ENSMUST00000175462 126 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm22002-201ENSMUST00000175622 125 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm25598-201ENSMUST00000179031 107 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msh4Q99MT2 V1rg10-201ENSMUST00000183378 937 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm29201-201ENSMUST00000189120 431 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm37193-201ENSMUST00000193087 513 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm38213-201ENSMUST00000193203 173 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 Gm17935-201ENSMUST00000196649 772 ntBASIC5.19□□□□□ -1.58
Msh4Q99MT2 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms