Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm25418-201ENSMUST00000104214 129 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm14995-201ENSMUST00000117135 391 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm8424-201ENSMUST00000117716 988 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm9085-201ENSMUST00000119994 1072 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm11805-201ENSMUST00000121238 600 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm15275-201ENSMUST00000154752 347 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm27036-201ENSMUST00000182465 980 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Mir6400-201ENSMUST00000184870 92 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm38131-201ENSMUST00000192449 430 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Igkv3-8-201ENSMUST00000197635 339 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm45498-201ENSMUST00000210346 283 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm45734-201ENSMUST00000211916 411 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 AC154296.3-201ENSMUST00000214427 712 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Gm7040-201ENSMUST00000223271 443 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 AL589696.1-201ENSMUST00000225711 330 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Mir331-201ENSMUST00000083673 96 ntBASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC3.84□□□□□ -1.79
Nup35Q8R4R6 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Nup35Q8R4R6 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Nup35Q8R4R6 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Nup35Q8R4R6 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Nup35Q8R4R6 Gm37696-201ENSMUST00000194223 3349 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm14871-201ENSMUST00000119056 194 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm14125-202ENSMUST00000120921 756 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 n-R5s24-201ENSMUST00000122518 117 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm16114-201ENSMUST00000161930 300 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm29097-201ENSMUST00000190273 422 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm43015-201ENSMUST00000199087 565 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 AC161456.1-201ENSMUST00000206771 887 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm44776-201ENSMUST00000207212 381 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 AC153840.1-201ENSMUST00000219685 313 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm9269-201ENSMUST00000221661 578 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm9202-201ENSMUST00000223036 437 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm5215-201ENSMUST00000054380 405 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm24706-201ENSMUST00000082806 137 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm17791-201ENSMUST00000185660 1501 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 AC102847.2-201ENSMUST00000227799 2906 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Gm38101-201ENSMUST00000193484 3557 ntBASIC3.83□□□□□ -1.8
Nup35Q8R4R6 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nup35Q8R4R6 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nup35Q8R4R6 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nup35Q8R4R6 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nup35Q8R4R6 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nup35Q8R4R6 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nup35Q8R4R6 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nup35Q8R4R6 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nup35Q8R4R6 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms