Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm23737-201ENSMUST00000082547 159 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm21286-201ENSMUST00000098035 545 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm22072-201ENSMUST00000116850 121 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm14529-201ENSMUST00000117894 406 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm14115-201ENSMUST00000119242 482 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm15801-201ENSMUST00000120920 522 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm14506-201ENSMUST00000121165 536 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm12488-201ENSMUST00000122449 499 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm8783-201ENSMUST00000159764 522 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm9597-201ENSMUST00000171913 602 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm20453-201ENSMUST00000173968 226 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm22569-201ENSMUST00000175545 124 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm29413-201ENSMUST00000186019 880 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm29639-201ENSMUST00000188375 580 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm37054-201ENSMUST00000193481 543 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm43350-201ENSMUST00000196382 711 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm42961-201ENSMUST00000202023 181 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm45082-201ENSMUST00000206082 601 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm45485-201ENSMUST00000211229 357 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm46192-201ENSMUST00000217894 326 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm4263-202ENSMUST00000221392 667 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 AC156560.1-201ENSMUST00000221425 256 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm18413-201ENSMUST00000221573 655 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm5612-201ENSMUST00000053326 375 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm5582-201ENSMUST00000075251 522 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Olfr467-201ENSMUST00000084756 927 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.47□□□□□ -1.53
Clrn1Q8K445 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms