Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm6134-201ENSMUST00000117265 171 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm11975-201ENSMUST00000118772 481 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Mup-ps15-201ENSMUST00000121741 539 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm23993-201ENSMUST00000157478 144 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm17091-201ENSMUST00000163248 357 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm26925-201ENSMUST00000182470 957 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm18802-201ENSMUST00000186270 888 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm28438-201ENSMUST00000188299 345 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm38015-201ENSMUST00000193048 188 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm45878-201ENSMUST00000211839 241 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 AL645546.2-201ENSMUST00000224526 265 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm8526-201ENSMUST00000079153 475 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm6065-201ENSMUST00000081336 492 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Olfr1160-201ENSMUST00000099839 960 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm7680-201ENSMUST00000216198 1348 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.88□□□□□ -1.63
Ccdc28bQ8CEG5 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm38029-201ENSMUST00000192669 2090 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm12261-201ENSMUST00000117499 645 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm13579-201ENSMUST00000118519 517 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm15233-201ENSMUST00000118747 400 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm15828-201ENSMUST00000119911 522 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm23669-201ENSMUST00000157470 128 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm25459-201ENSMUST00000157953 114 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm18969-201ENSMUST00000189423 730 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm6546-201ENSMUST00000192096 766 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm43005-201ENSMUST00000199015 648 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm44232-201ENSMUST00000204537 225 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm44892-201ENSMUST00000208595 488 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Gm17988-201ENSMUST00000208796 535 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 AC123665.4-201ENSMUST00000228790 249 ntBASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc28bQ8CEG5 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms