Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm12820-201ENSMUST00000119233 342 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm12332-201ENSMUST00000121397 922 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm26490-201ENSMUST00000157879 140 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm20239-201ENSMUST00000196610 982 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm4602-201ENSMUST00000203198 308 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm18193-201ENSMUST00000210017 772 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 AV026068-237ENSMUST00000226075 572 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm25134-201ENSMUST00000082646 160 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm26330-201ENSMUST00000082817 104 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Nup88Q8CEC0 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm24117-201ENSMUST00000103973 133 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm23879-201ENSMUST00000116874 126 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm12039-201ENSMUST00000118219 180 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm14046-201ENSMUST00000119389 509 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm12704-201ENSMUST00000119789 464 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm6673-201ENSMUST00000166114 700 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm2147-201ENSMUST00000193588 639 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm19080-201ENSMUST00000196082 550 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm43524-201ENSMUST00000197278 298 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm6195-201ENSMUST00000063059 357 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm23626-201ENSMUST00000082458 133 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Nup88Q8CEC0 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm22272-201ENSMUST00000104039 134 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm15388-201ENSMUST00000121578 726 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm25290-201ENSMUST00000122796 144 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm25669-201ENSMUST00000157699 112 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Mir7028-201ENSMUST00000185016 64 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm43037-201ENSMUST00000196808 250 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm2142-201ENSMUST00000197899 589 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm2607-201ENSMUST00000212389 627 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 AC165437.1-201ENSMUST00000228640 536 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nup88Q8CEC0 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms