Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23177-201ENSMUST00000116784 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm24193-201ENSMUST00000116801 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm24744-201ENSMUST00000116833 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm24427-201ENSMUST00000116896 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm22346-201ENSMUST00000116918 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm23606-201ENSMUST00000116938 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm22029-201ENSMUST00000116940 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm26298-201ENSMUST00000116956 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm23844-201ENSMUST00000116959 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm24484-201ENSMUST00000117009 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm25347-201ENSMUST00000117026 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm22112-201ENSMUST00000117032 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm15971-201ENSMUST00000119372 211 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm5699-201ENSMUST00000152491 723 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm16300-201ENSMUST00000160031 1279 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Ear-ps10-201ENSMUST00000161871 460 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm17091-201ENSMUST00000163248 357 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm22991-201ENSMUST00000178126 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm25754-201ENSMUST00000178653 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm22419-201ENSMUST00000178780 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm24802-201ENSMUST00000178897 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm25208-201ENSMUST00000178964 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm24567-201ENSMUST00000179294 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm23943-201ENSMUST00000179712 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm25228-201ENSMUST00000180121 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm23304-201ENSMUST00000180209 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Mir6412-201ENSMUST00000184477 97 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm27163-201ENSMUST00000184767 409 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm29299-201ENSMUST00000185609 923 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm4412-201ENSMUST00000186660 433 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm8282-201ENSMUST00000187559 483 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm18117-201ENSMUST00000187720 742 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm29573-201ENSMUST00000190291 919 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Igkv12-49-201ENSMUST00000197714 278 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm38395-201ENSMUST00000199904 830 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 AL772265.1-201ENSMUST00000214379 305 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 AC153957.1-201ENSMUST00000215235 229 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm19936-201ENSMUST00000216414 838 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 AC154851.1-201ENSMUST00000221591 655 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 AC164116.1-201ENSMUST00000225810 622 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 CT030238.1-201ENSMUST00000228393 442 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms