Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.08□□□□□ -1.6
Nup54Q8BTS4 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC5.08□□□□□ -1.6
Nup54Q8BTS4 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.08□□□□□ -1.6
Nup54Q8BTS4 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nup54Q8BTS4 Gm44286-201ENSMUST00000204098 1487 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm12752-201ENSMUST00000121657 811 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm12685-201ENSMUST00000121702 214 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm23673-201ENSMUST00000157474 298 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm23964-201ENSMUST00000157966 107 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm22355-201ENSMUST00000175531 96 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Mir7006-201ENSMUST00000183624 69 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm28976-201ENSMUST00000188070 144 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm21803-201ENSMUST00000188897 693 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm19891-201ENSMUST00000189771 303 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Nup54Q8BTS4 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm24578-201ENSMUST00000103970 129 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm14930-201ENSMUST00000118864 652 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm13213-201ENSMUST00000119668 474 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm13484-201ENSMUST00000120738 412 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm12222-201ENSMUST00000121368 260 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm22226-201ENSMUST00000157355 109 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm24944-201ENSMUST00000158330 128 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm22529-201ENSMUST00000158817 123 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm3531-201ENSMUST00000162698 489 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm9457-201ENSMUST00000180176 372 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm28877-201ENSMUST00000191349 604 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm18529-201ENSMUST00000193025 1257 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm19936-201ENSMUST00000216414 838 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm6776-201ENSMUST00000057752 900 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm23626-201ENSMUST00000082458 133 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nup54Q8BTS4 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms