Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm5285-201ENSMUST00000193089 666 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm37882-201ENSMUST00000195254 196 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm33952-201ENSMUST00000197795 408 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm42542-201ENSMUST00000197978 268 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm45215-201ENSMUST00000206407 395 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 AC073947.1-201ENSMUST00000216991 649 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 AC158142.3-201ENSMUST00000226230 675 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm23750-201ENSMUST00000104222 132 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm14861-201ENSMUST00000119451 455 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm11584-201ENSMUST00000120636 325 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm13533-201ENSMUST00000121104 177 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm12422-201ENSMUST00000121431 302 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm8061-201ENSMUST00000122380 350 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm23225-201ENSMUST00000158121 114 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm3008-201ENSMUST00000160566 571 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm21991-201ENSMUST00000180006 508 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Mir7687-201ENSMUST00000184722 59 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm18348-201ENSMUST00000191227 820 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm8939-201ENSMUST00000192577 964 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm19761-201ENSMUST00000205372 391 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm20074-201ENSMUST00000208144 484 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm46996-201ENSMUST00000220924 408 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Mir99a-201ENSMUST00000083596 65 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Ccdc40Q8BI79 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 110.8 ms