Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 AC173345.3-201ENSMUST00000221245 1093 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Mir804-201ENSMUST00000103251 95 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm13195-201ENSMUST00000117229 261 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm14943-201ENSMUST00000118056 546 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21756-201ENSMUST00000178380 930 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21405-201ENSMUST00000179024 930 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm27541-201ENSMUST00000184078 122 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21191-201ENSMUST00000186484 930 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28604-201ENSMUST00000186629 484 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28566-201ENSMUST00000186714 484 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28194-201ENSMUST00000187412 484 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28886-202ENSMUST00000187889 484 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28925-201ENSMUST00000188586 168 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28554-202ENSMUST00000189175 484 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm29213-202ENSMUST00000189703 484 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28851-202ENSMUST00000189757 484 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm28461-201ENSMUST00000190023 484 ntBASIC5.34□□□□□ -1.55
Ubfd1Q78JW9 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms