Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm6631-201ENSMUST00000193699 559 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm28724-202ENSMUST00000194218 295 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm8041-201ENSMUST00000199755 616 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm42799-201ENSMUST00000201331 328 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm45850-201ENSMUST00000212536 338 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm46223-201ENSMUST00000215196 675 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 AC115878.1-201ENSMUST00000227247 334 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm25147-201ENSMUST00000083030 105 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm6494-201ENSMUST00000218604 2298 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm20706-201ENSMUST00000175985 2023 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm8501-201ENSMUST00000117684 432 ntBASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm13349-201ENSMUST00000118436 411 ntBASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm14881-201ENSMUST00000120366 372 ntBASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm12808-201ENSMUST00000120597 404 ntBASIC11.24□□□□□ -0.61
Trim41Q5NCC3 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm18604-201ENSMUST00000172535 558 ntBASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm9710-201ENSMUST00000198053 499 ntBASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm44295-201ENSMUST00000203805 437 ntBASIC11.24□□□□□ -0.61
Trim41Q5NCC3 AC154806.5-205ENSMUST00000228828 411 ntBASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim41Q5NCC3 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm22103-201ENSMUST00000116733 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm26475-201ENSMUST00000116769 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm23620-201ENSMUST00000116812 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm25042-201ENSMUST00000116856 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm25540-201ENSMUST00000116880 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm14987-201ENSMUST00000117820 676 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm12442-201ENSMUST00000118372 338 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm12155-201ENSMUST00000121267 160 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Calr-ps-201ENSMUST00000121776 485 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Klra13-ps-201ENSMUST00000125813 802 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm15838-201ENSMUST00000161575 180 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm23550-201ENSMUST00000179003 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm25123-201ENSMUST00000179154 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm25353-201ENSMUST00000179366 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm22992-201ENSMUST00000179496 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm25892-201ENSMUST00000179867 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm24092-201ENSMUST00000180257 121 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm45474-201ENSMUST00000209471 408 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 AC101677.1-201ENSMUST00000218590 158 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 AC117769.2-201ENSMUST00000224612 469 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 AC159979.1-201ENSMUST00000227927 342 ntBASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim41Q5NCC3 Gm23093-201ENSMUST00000083450 102 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms