Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.8□□□□□ -1.64
Scn2bQ56A07 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn2bQ56A07 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn2bQ56A07 Gm24166-201ENSMUST00000082724 135 ntBASIC4.8□□□□□ -1.64
Scn2bQ56A07 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.8□□□□□ -1.64
Scn2bQ56A07 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Scn2bQ56A07 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scn2bQ56A07 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.8□□□□□ -1.64
Scn2bQ56A07 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scn2bQ56A07 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn2bQ56A07 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scn2bQ56A07 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.8□□□□□ -1.64
Scn2bQ56A07 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.8□□□□□ -1.64
Scn2bQ56A07 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Scn2bQ56A07 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.8□□□□□ -1.64
Scn2bQ56A07 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Scn2bQ56A07 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 Gm8129-201ENSMUST00000118230 213 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 Gm13491-201ENSMUST00000118267 235 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Gm9569-201ENSMUST00000187492 787 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 AC122301.1-201ENSMUST00000219625 507 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 Gm7040-201ENSMUST00000223271 443 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 AC154452.1-201ENSMUST00000225819 241 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 Gm5045-201ENSMUST00000027054 810 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.79□□□□□ -1.64
Scn2bQ56A07 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scn2bQ56A07 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm3267-201ENSMUST00000118671 473 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm11196-201ENSMUST00000119052 395 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm23327-201ENSMUST00000157420 78 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm21756-201ENSMUST00000178380 930 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm21405-201ENSMUST00000179024 930 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm21191-201ENSMUST00000186484 930 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm29503-201ENSMUST00000191044 930 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm18426-201ENSMUST00000191874 973 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm9038-201ENSMUST00000203400 604 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm20997-201ENSMUST00000205148 231 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm18510-201ENSMUST00000219335 1096 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm2099-201ENSMUST00000220979 412 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scn2bQ56A07 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.78□□□□□ -1.64
Scn2bQ56A07 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Scn2bQ56A07 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms