Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm43968-201ENSMUST00000203388 389 ntBASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Gm29781-201ENSMUST00000203862 478 ntBASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Gm44648-201ENSMUST00000208267 329 ntBASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Upf3aQ3ULJ3 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm12112-201ENSMUST00000117772 231 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm11584-201ENSMUST00000120636 325 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm13440-201ENSMUST00000121665 496 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm16571-201ENSMUST00000159112 291 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm18342-201ENSMUST00000186987 694 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm2427-201ENSMUST00000189121 881 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm20940-201ENSMUST00000197308 360 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm44402-201ENSMUST00000203677 238 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm44623-201ENSMUST00000207934 434 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm6562-201ENSMUST00000221903 464 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Upf3aQ3ULJ3 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 BC055308-201ENSMUST00000193380 2538 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm11970-201ENSMUST00000116105 320 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm24444-201ENSMUST00000157244 308 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm23906-201ENSMUST00000157573 128 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm22852-201ENSMUST00000177899 101 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm21856-201ENSMUST00000187547 696 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm21735-201ENSMUST00000190360 696 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3aQ3ULJ3 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.21□□□□□ -1.57
Upf3aQ3ULJ3 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.21□□□□□ -1.57
Upf3aQ3ULJ3 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Upf3aQ3ULJ3 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.21□□□□□ -1.58
Upf3aQ3ULJ3 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms