Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Mir690-201ENSMUST00000102110 109 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm12458-201ENSMUST00000119387 495 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm12379-201ENSMUST00000119607 391 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm12340-201ENSMUST00000121617 462 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm24507-201ENSMUST00000157683 134 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm26486-201ENSMUST00000158021 110 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm27940-201ENSMUST00000184449 98 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm29452-201ENSMUST00000187996 313 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm28860-201ENSMUST00000188103 313 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm5885-202ENSMUST00000203357 528 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm5548-201ENSMUST00000055878 397 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 AC135669.2-201ENSMUST00000215636 4958 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm15364-201ENSMUST00000119618 585 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm11679-201ENSMUST00000121830 779 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm4479-201ENSMUST00000178807 171 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm17780-201ENSMUST00000207142 612 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Gm39197-201ENSMUST00000212069 457 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.52□□□□□ -1.69
Spg11Q3UHA3 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm14621-201ENSMUST00000117709 689 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm15988-201ENSMUST00000118677 367 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm25977-201ENSMUST00000158697 85 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm26379-202ENSMUST00000200225 132 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm29793-201ENSMUST00000202874 460 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm32526-201ENSMUST00000221878 981 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 AL591843.1-201ENSMUST00000223686 3082 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm22536-201ENSMUST00000158171 134 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm25348-201ENSMUST00000158961 111 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm17121-201ENSMUST00000170414 847 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm17222-201ENSMUST00000180135 847 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm27033-201ENSMUST00000183226 544 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm22897-202ENSMUST00000197782 127 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm42579-201ENSMUST00000200512 734 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm4987-201ENSMUST00000078326 408 ntBASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Spg11Q3UHA3 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Mir551b-201ENSMUST00000102165 98 ntBASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Gm25764-201ENSMUST00000104092 134 ntBASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Gm13593-201ENSMUST00000121329 692 ntBASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Gm11761-201ENSMUST00000121392 445 ntBASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Gm27249-201ENSMUST00000185049 328 ntBASIC4.5□□□□□ -1.69
Spg11Q3UHA3 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms