Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.56□□□□□ -1.52
CiitaP79621 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CiitaP79621 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CiitaP79621 Gm26143-201ENSMUST00000104480 108 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CiitaP79621 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CiitaP79621 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Gm16089-201ENSMUST00000117679 336 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Gm11346-201ENSMUST00000118346 704 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Gm3267-201ENSMUST00000118671 473 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.56□□□□□ -1.52
CiitaP79621 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Gm16254-201ENSMUST00000131528 730 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CiitaP79621 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.56□□□□□ -1.52
CiitaP79621 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CiitaP79621 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.56□□□□□ -1.52
CiitaP79621 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CiitaP79621 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.56□□□□□ -1.52
CiitaP79621 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC5.56□□□□□ -1.52
CiitaP79621 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CiitaP79621 Gm8719-201ENSMUST00000203602 534 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Gm18255-201ENSMUST00000211316 765 ntBASIC5.56□□□□□ -1.52
CiitaP79621 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.56□□□□□ -1.52
CiitaP79621 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.56□□□□□ -1.52
CiitaP79621 Gm19936-201ENSMUST00000216414 838 ntBASIC5.56□□□□□ -1.52
CiitaP79621 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.56□□□□□ -1.52
CiitaP79621 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.56□□□□□ -1.52
CiitaP79621 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CiitaP79621 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CiitaP79621 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CiitaP79621 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CiitaP79621 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CiitaP79621 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CiitaP79621 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
CiitaP79621 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CiitaP79621 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.56□□□□□ -1.52
CiitaP79621 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.55□□□□□ -1.52
CiitaP79621 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CiitaP79621 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CiitaP79621 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
CiitaP79621 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm15670-201ENSMUST00000117740 447 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm15357-201ENSMUST00000119160 285 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm11510-201ENSMUST00000120278 347 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.55□□□□□ -1.52
CiitaP79621 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.55□□□□□ -1.52
CiitaP79621 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm25861-201ENSMUST00000158251 109 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CiitaP79621 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm16456-201ENSMUST00000174431 920 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm28967-201ENSMUST00000187351 281 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.55□□□□□ -1.52
CiitaP79621 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Gm37934-201ENSMUST00000192902 402 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm37005-201ENSMUST00000193281 1164 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm2147-201ENSMUST00000193588 639 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm20997-201ENSMUST00000205148 231 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.55□□□□□ -1.52
CiitaP79621 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.55□□□□□ -1.52
CiitaP79621 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.55□□□□□ -1.52
CiitaP79621 AV026068-237ENSMUST00000226075 572 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CiitaP79621 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm23796-201ENSMUST00000084011 160 ntBASIC5.55□□□□□ -1.52
CiitaP79621 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
CiitaP79621 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CiitaP79621 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CiitaP79621 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
CiitaP79621 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms