Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Cux1P53564 Gm22758-201ENSMUST00000102275 96 ntBASIC7.35□□□□□ -1.23
Cux1P53564 Gm5942-201ENSMUST00000120046 439 ntBASIC7.35□□□□□ -1.23
Cux1P53564 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC7.35□□□□□ -1.23
Cux1P53564 Gm24774-201ENSMUST00000157384 134 ntBASIC7.35□□□□□ -1.23
Cux1P53564 Gm24477-201ENSMUST00000157438 103 ntBASIC7.35□□□□□ -1.23
Cux1P53564 Gm44474-201ENSMUST00000196525 127 ntBASIC7.35□□□□□ -1.23
Cux1P53564 Gm21461-201ENSMUST00000200382 863 ntBASIC7.35□□□□□ -1.23
Cux1P53564 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
Cux1P53564 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Cux1P53564 Gm43085-201ENSMUST00000202859 3132 ntBASIC7.35□□□□□ -1.23
Cux1P53564 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Cux1P53564 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.35□□□□□ -1.23
Cux1P53564 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Cux1P53564 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Cux1P53564 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Cux1P53564 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Cux1P53564 Gm37749-201ENSMUST00000193917 1899 ntBASIC7.35□□□□□ -1.23
Cux1P53564 Gm43990-201ENSMUST00000203790 1691 ntBASIC7.34□□□□□ -1.23
Cux1P53564 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC7.34□□□□□ -1.23
Cux1P53564 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Cux1P53564 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC7.34□□□□□ -1.23
Cux1P53564 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC7.34□□□□□ -1.23
Cux1P53564 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC7.34□□□□□ -1.23
Cux1P53564 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cux1P53564 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Cux1P53564 Gm11631-201ENSMUST00000119220 156 ntBASIC7.34□□□□□ -1.23
Cux1P53564 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC7.34□□□□□ -1.23
Cux1P53564 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Cux1P53564 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Cux1P53564 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC7.34□□□□□ -1.23
Cux1P53564 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Cux1P53564 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC7.34□□□□□ -1.23
Cux1P53564 Gm3145-201ENSMUST00000188584 220 ntBASIC7.34□□□□□ -1.23
Cux1P53564 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC7.34□□□□□ -1.23
Cux1P53564 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cux1P53564 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC7.34□□□□□ -1.23
Cux1P53564 Gm18442-201ENSMUST00000220925 639 ntBASIC7.34□□□□□ -1.23
Cux1P53564 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.34□□□□□ -1.23
Cux1P53564 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Cux1P53564 Gm38125-201ENSMUST00000194136 3438 ntBASIC7.34□□□□□ -1.23
Cux1P53564 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cux1P53564 Gm44742-201ENSMUST00000207190 1412 ntBASIC7.34□□□□□ -1.23
Cux1P53564 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Cux1P53564 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Cux1P53564 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Cux1P53564 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
Cux1P53564 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Cux1P53564 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cux1P53564 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Cux1P53564 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Cux1P53564 Gm4914-201ENSMUST00000119757 459 ntBASIC7.33□□□□□ -1.24
Cux1P53564 Gm5963-201ENSMUST00000143451 236 ntBASIC7.33□□□□□ -1.24
Cux1P53564 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Cux1P53564 Gm3077-201ENSMUST00000165903 627 ntBASIC7.33□□□□□ -1.24
Cux1P53564 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC7.33□□□□□ -1.24
Cux1P53564 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC7.33□□□□□ -1.24
Cux1P53564 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC7.33□□□□□ -1.24
Cux1P53564 Gm3912-203ENSMUST00000211024 367 ntBASIC7.33□□□□□ -1.24
Cux1P53564 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cux1P53564 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC7.33□□□□□ -1.24
Cux1P53564 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cux1P53564 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cux1P53564 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Cux1P53564 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Cux1P53564 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cux1P53564 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC7.32□□□□□ -1.24
Cux1P53564 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cux1P53564 Gm25846-201ENSMUST00000158013 135 ntBASIC7.32□□□□□ -1.24
Cux1P53564 Gm16558-201ENSMUST00000163015 532 ntBASIC7.32□□□□□ -1.24
Cux1P53564 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Cux1P53564 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Cux1P53564 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC7.32□□□□□ -1.24
Cux1P53564 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Cux1P53564 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Cux1P53564 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Cux1P53564 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Cux1P53564 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Cux1P53564 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Cux1P53564 Gm8069-201ENSMUST00000197887 154 ntBASIC7.32□□□□□ -1.24
Cux1P53564 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC7.32□□□□□ -1.24
Cux1P53564 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC7.32□□□□□ -1.24
Cux1P53564 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cux1P53564 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cux1P53564 Gm29488-201ENSMUST00000191427 2402 ntBASIC7.32□□□□□ -1.24
Cux1P53564 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cux1P53564 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Cux1P53564 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cux1P53564 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cux1P53564 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cux1P53564 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Cux1P53564 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Cux1P53564 Gm24239-201ENSMUST00000157791 255 ntBASIC7.32□□□□□ -1.24
Cux1P53564 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC7.32□□□□□ -1.24
Cux1P53564 Gm27266-201ENSMUST00000184521 123 ntBASIC7.32□□□□□ -1.24
Cux1P53564 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Cux1P53564 Gm42999-201ENSMUST00000198049 786 ntBASIC7.32□□□□□ -1.24
Cux1P53564 Gm43604-201ENSMUST00000199799 705 ntBASIC7.32□□□□□ -1.24
Cux1P53564 Gm19201-201ENSMUST00000210127 778 ntBASIC7.32□□□□□ -1.24
Cux1P53564 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms