Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Shmt1P50431 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.84□□□□□ -1.47
Shmt1P50431 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Shmt1P50431 Gm13887-201ENSMUST00000119009 344 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Defa-ps1-201ENSMUST00000119062 282 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm11357-201ENSMUST00000119758 954 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm11404-201ENSMUST00000120872 494 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Defa-ps6-201ENSMUST00000122172 282 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm24592-201ENSMUST00000122505 106 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Shmt1P50431 Scarna6-201ENSMUST00000158656 265 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.84□□□□□ -1.47
Shmt1P50431 Mir3080-201ENSMUST00000175010 79 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm22411-201ENSMUST00000175462 126 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm22002-201ENSMUST00000175622 125 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Shmt1P50431 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.84□□□□□ -1.47
Shmt1P50431 Gm21654-201ENSMUST00000188086 691 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm20954-201ENSMUST00000189078 644 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm2367-201ENSMUST00000192374 472 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm38185-201ENSMUST00000193195 694 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm44300-201ENSMUST00000196792 121 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.84□□□□□ -1.47
Shmt1P50431 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
Shmt1P50431 Gm44023-201ENSMUST00000203710 469 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm43884-201ENSMUST00000204251 559 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm44972-201ENSMUST00000206419 406 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm44773-201ENSMUST00000207374 557 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC5.84□□□□□ -1.47
Shmt1P50431 Gm6474-201ENSMUST00000223250 699 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Shmt1P50431 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Shmt1P50431 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.84□□□□□ -1.47
Shmt1P50431 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Shmt1P50431 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Shmt1P50431 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Shmt1P50431 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.84□□□□□ -1.48
Shmt1P50431 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Shmt1P50431 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Shmt1P50431 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Shmt1P50431 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
Shmt1P50431 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Shmt1P50431 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Shmt1P50431 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Shmt1P50431 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Shmt1P50431 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Shmt1P50431 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Gm12807-201ENSMUST00000121546 962 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.83□□□□□ -1.48
Shmt1P50431 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm24498-201ENSMUST00000158445 102 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Gm23022-201ENSMUST00000158768 180 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Gm22529-201ENSMUST00000158817 123 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Shmt1P50431 Adgrg4-206ENSMUST00000168724 531 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Gm20397-201ENSMUST00000174520 362 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Gm5946-201ENSMUST00000182340 970 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC5.83□□□□□ -1.48
Shmt1P50431 Mir6539-201ENSMUST00000183732 110 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm28604-201ENSMUST00000186629 484 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Shmt1P50431 Gm28566-201ENSMUST00000186714 484 ntBASIC5.83□□□□□ -1.48
Shmt1P50431 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms