Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm23673-201ENSMUST00000157474 298 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm22895-201ENSMUST00000157508 308 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm16107-201ENSMUST00000162523 862 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm8358-201ENSMUST00000167222 555 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm20401-201ENSMUST00000173717 212 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm16378-201ENSMUST00000179168 342 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm7266-201ENSMUST00000187999 405 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm2011-203ENSMUST00000203750 435 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm20997-201ENSMUST00000205148 231 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm45276-201ENSMUST00000209549 1086 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Zfp429-203ENSMUST00000224684 524 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Clec2j-201ENSMUST00000032517 515 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Gm23300-201ENSMUST00000082712 125 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Tnfsf4P43488 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Tnfsf4P43488 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Tnfsf4P43488 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.54□□□□□ -1.68
Tnfsf4P43488 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Tnfsf4P43488 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Tnfsf4P43488 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm11804-201ENSMUST00000121663 468 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Mir3060-201ENSMUST00000175339 83 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm28097-201ENSMUST00000187333 366 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm17953-201ENSMUST00000192061 667 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm6649-201ENSMUST00000199743 1165 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm17811-201ENSMUST00000206193 387 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.53□□□□□ -1.68
Tnfsf4P43488 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 AC154806.4-201ENSMUST00000227406 439 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm25140-201ENSMUST00000083254 140 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.53□□□□□ -1.68
Tnfsf4P43488 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Tnfsf4P43488 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Tnfsf4P43488 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Tnfsf4P43488 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm15073-201ENSMUST00000117432 634 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm6647-201ENSMUST00000170514 641 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Mir6344-201ENSMUST00000183462 104 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm19206-201ENSMUST00000186401 827 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm28769-201ENSMUST00000190176 615 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm42437-201ENSMUST00000197263 923 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm5284-201ENSMUST00000199053 903 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm43276-201ENSMUST00000199712 364 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm21461-201ENSMUST00000200382 863 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm44879-201ENSMUST00000207007 503 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm33601-201ENSMUST00000210001 961 ntBASIC4.52□□□□□ -1.69
Tnfsf4P43488 Gm6850-201ENSMUST00000210031 530 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms