Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cdx2P43241 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cdx2P43241 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Cdx2P43241 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx2P43241 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdx2P43241 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx2P43241 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cdx2P43241 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx2P43241 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx2P43241 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx2P43241 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.7□□□□□ -1.66
Cdx2P43241 Gm14560-201ENSMUST00000118672 375 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm13220-201ENSMUST00000121535 508 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm22343-201ENSMUST00000122648 286 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm25907-201ENSMUST00000158486 125 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm23162-201ENSMUST00000175081 121 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Mir7022-201ENSMUST00000183749 61 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm28195-201ENSMUST00000186992 372 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm9569-201ENSMUST00000187492 787 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm2147-201ENSMUST00000193588 639 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.7□□□□□ -1.66
Cdx2P43241 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.7□□□□□ -1.66
Cdx2P43241 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Cdx2P43241 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.7□□□□□ -1.66
Cdx2P43241 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.7□□□□□ -1.66
Cdx2P43241 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.7□□□□□ -1.66
Cdx2P43241 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx2P43241 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx2P43241 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx2P43241 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdx2P43241 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx2P43241 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdx2P43241 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Cdx2P43241 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.7□□□□□ -1.66
Cdx2P43241 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cdx2P43241 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Cdx2P43241 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.69□□□□□ -1.66
Cdx2P43241 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.69□□□□□ -1.66
Cdx2P43241 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.69□□□□□ -1.66
Cdx2P43241 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm14610-201ENSMUST00000118358 966 ntBASIC4.69□□□□□ -1.66
Cdx2P43241 Gm13808-201ENSMUST00000121353 184 ntBASIC4.69□□□□□ -1.66
Cdx2P43241 Gm12752-201ENSMUST00000121657 811 ntBASIC4.69□□□□□ -1.66
Cdx2P43241 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Cdx2P43241 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdx2P43241 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.69□□□□□ -1.66
Cdx2P43241 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm27834-201ENSMUST00000183427 125 ntBASIC4.69□□□□□ -1.66
Cdx2P43241 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm18426-201ENSMUST00000191874 973 ntBASIC4.69□□□□□ -1.66
Cdx2P43241 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC4.69□□□□□ -1.66
Cdx2P43241 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdx2P43241 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
Cdx2P43241 Mir346-201ENSMUST00000083547 98 ntBASIC4.69□□□□□ -1.66
Cdx2P43241 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cdx2P43241 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cdx2P43241 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.69□□□□□ -1.66
Cdx2P43241 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx2P43241 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Cdx2P43241 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.68□□□□□ -1.66
Cdx2P43241 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Cdx2P43241 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Cdx2P43241 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx2P43241 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
Cdx2P43241 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx2P43241 Gm15752-201ENSMUST00000117427 394 ntBASIC4.68□□□□□ -1.66
Cdx2P43241 Gm15022-201ENSMUST00000122074 746 ntBASIC4.68□□□□□ -1.66
Cdx2P43241 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.68□□□□□ -1.66
Cdx2P43241 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.68□□□□□ -1.66
Cdx2P43241 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 Gm22395-201ENSMUST00000177427 96 ntBASIC4.68□□□□□ -1.66
Cdx2P43241 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx2P43241 Mir6960-201ENSMUST00000183449 61 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms