Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.42□□□□□ -1.7
P20040 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
P20040 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.42□□□□□ -1.7
P20040 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
P20040 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
P20040 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
P20040 Mir20a-201ENSMUST00000083508 107 ntBASIC4.42□□□□□ -1.7
P20040 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
P20040 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
P20040 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
P20040 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
P20040 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
P20040 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
P20040 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.42□□□□□ -1.7
P20040 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.42□□□□□ -1.7
P20040 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
P20040 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
P20040 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.42□□□□□ -1.7
P20040 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
P20040 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
P20040 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.42□□□□□ -1.7
P20040 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.41□□□□□ -1.7
P20040 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.41□□□□□ -1.7
P20040 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
P20040 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.41□□□□□ -1.7
P20040 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
P20040 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
P20040 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 Lipe-203ENSMUST00000105177 1251 ntBASIC4.41□□□□□ -1.7
P20040 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
P20040 Gm15074-201ENSMUST00000117603 936 ntBASIC4.41□□□□□ -1.7
P20040 Gm12039-201ENSMUST00000118219 180 ntBASIC4.41□□□□□ -1.7
P20040 Gm12638-201ENSMUST00000119531 298 ntBASIC4.41□□□□□ -1.7
P20040 Gm15780-201ENSMUST00000121283 935 ntBASIC4.41□□□□□ -1.7
P20040 Gm22958-201ENSMUST00000122512 184 ntBASIC4.41□□□□□ -1.7
P20040 Gm25293-201ENSMUST00000122792 285 ntBASIC4.41□□□□□ -1.7
P20040 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 Gm23993-201ENSMUST00000157478 144 ntBASIC4.41□□□□□ -1.7
P20040 Gm22725-201ENSMUST00000158092 110 ntBASIC4.41□□□□□ -1.7
P20040 Gm23855-201ENSMUST00000158377 135 ntBASIC4.41□□□□□ -1.7
P20040 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.41□□□□□ -1.7
P20040 Gm22857-201ENSMUST00000174969 134 ntBASIC4.41□□□□□ -1.7
P20040 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.41□□□□□ -1.7
P20040 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.41□□□□□ -1.7
P20040 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.41□□□□□ -1.7
P20040 Gm17981-201ENSMUST00000191109 739 ntBASIC4.41□□□□□ -1.7
P20040 Gm37614-201ENSMUST00000195645 210 ntBASIC4.41□□□□□ -1.7
P20040 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 Gm44603-201ENSMUST00000206820 367 ntBASIC4.41□□□□□ -1.7
P20040 Gm44776-201ENSMUST00000207212 381 ntBASIC4.41□□□□□ -1.7
P20040 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
P20040 Gm3213-201ENSMUST00000219296 441 ntBASIC4.41□□□□□ -1.7
P20040 Gm6049-201ENSMUST00000222369 458 ntBASIC4.41□□□□□ -1.7
P20040 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.41□□□□□ -1.7
P20040 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P20040 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.41□□□□□ -1.7
P20040 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
P20040 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
P20040 Gm24763-201ENSMUST00000083688 190 ntBASIC4.41□□□□□ -1.7
P20040 Gm22155-201ENSMUST00000083836 162 ntBASIC4.41□□□□□ -1.7
P20040 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
P20040 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.41□□□□□ -1.7
P20040 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC4.41□□□□□ -1.7
P20040 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.41□□□□□ -1.7
P20040 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
P20040 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.41□□□□□ -1.7
P20040 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
P20040 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
P20040 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.4□□□□□ -1.7
P20040 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
P20040 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
P20040 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
P20040 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.4□□□□□ -1.7
P20040 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
P20040 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
P20040 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.4□□□□□ -1.71
P20040 H3f3c-201ENSMUST00000119459 411 ntBASIC4.4□□□□□ -1.71
P20040 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
P20040 Gm13430-201ENSMUST00000121366 288 ntBASIC4.4□□□□□ -1.71
P20040 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.4□□□□□ -1.71
P20040 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.4□□□□□ -1.71
P20040 Gm25389-201ENSMUST00000157340 286 ntBASIC4.4□□□□□ -1.71
P20040 Gm26490-201ENSMUST00000157879 140 ntBASIC4.4□□□□□ -1.71
P20040 Gm25714-201ENSMUST00000158626 296 ntBASIC4.4□□□□□ -1.71
P20040 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
P20040 Gm21756-201ENSMUST00000178380 930 ntBASIC4.4□□□□□ -1.71
P20040 Gm21405-201ENSMUST00000179024 930 ntBASIC4.4□□□□□ -1.71
P20040 Gm26731-201ENSMUST00000180683 543 ntBASIC4.4□□□□□ -1.71
P20040 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
P20040 Gm29596-201ENSMUST00000185710 385 ntBASIC4.4□□□□□ -1.71
P20040 Gm21191-201ENSMUST00000186484 930 ntBASIC4.4□□□□□ -1.71
P20040 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.4□□□□□ -1.71
P20040 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms