Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm23318-201ENSMUST00000158000 108 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm22529-201ENSMUST00000158817 123 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm6647-201ENSMUST00000170514 641 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Mir7006-201ENSMUST00000183624 69 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm8999-201ENSMUST00000204951 969 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm45157-201ENSMUST00000208729 401 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm5215-201ENSMUST00000054380 405 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm7665-201ENSMUST00000076710 297 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm23796-201ENSMUST00000084011 160 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Chmp6P0C0A3 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm12717-201ENSMUST00000118427 983 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm13172-201ENSMUST00000118685 256 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm16463-201ENSMUST00000120527 721 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm12752-201ENSMUST00000121657 811 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm15227-201ENSMUST00000121844 399 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm16345-201ENSMUST00000146065 158 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm24685-201ENSMUST00000157764 285 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm22116-201ENSMUST00000158791 141 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Mir6416-201ENSMUST00000183664 117 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm36994-201ENSMUST00000192941 492 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm2053-201ENSMUST00000195671 631 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm43315-201ENSMUST00000198120 313 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Chmp6P0C0A3 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm8202-201ENSMUST00000117682 310 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm15012-201ENSMUST00000119176 106 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm13213-201ENSMUST00000119668 474 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm26153-201ENSMUST00000157433 127 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm16566-201ENSMUST00000160387 910 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm17081-201ENSMUST00000167363 478 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Mir6903-201ENSMUST00000183597 88 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm44277-201ENSMUST00000205128 649 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.3□□□□□ -1.56
Chmp6P0C0A3 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Chmp6P0C0A3 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms