Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm31711-201ENSMUST00000220687 196 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm36758-201ENSMUST00000222594 310 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 AC124489.1-201ENSMUST00000225852 526 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 AC154380.1-201ENSMUST00000226804 720 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm2840-201ENSMUST00000048361 411 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm24457-201ENSMUST00000083196 105 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Olfr713-201ENSMUST00000098139 975 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm8662-201ENSMUST00000118644 574 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm6584-201ENSMUST00000119671 447 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm9043-201ENSMUST00000119677 314 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm7746-201ENSMUST00000120966 503 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm12872-201ENSMUST00000121835 320 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm14578-201ENSMUST00000122166 391 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm24680-201ENSMUST00000158759 126 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm4613-201ENSMUST00000165488 276 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm4557-201ENSMUST00000185826 907 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm4526-201ENSMUST00000186039 920 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm28604-201ENSMUST00000186629 484 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm28566-201ENSMUST00000186714 484 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm28194-201ENSMUST00000187412 484 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm28886-202ENSMUST00000187889 484 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm8708-201ENSMUST00000188500 906 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm28554-202ENSMUST00000189175 484 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm29213-202ENSMUST00000189703 484 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm28851-202ENSMUST00000189757 484 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm28461-201ENSMUST00000190023 484 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm32447-201ENSMUST00000194265 697 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm5853-201ENSMUST00000197183 632 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm43656-201ENSMUST00000197882 434 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm44471-201ENSMUST00000197963 100 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm43739-201ENSMUST00000198294 307 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Mir7227-201ENSMUST00000200408 59 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm6012-201ENSMUST00000210821 730 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm18487-201ENSMUST00000215826 878 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.49□□□□□ -1.53
Hoxd3P09027 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC5.49□□□□□ -1.53
Hoxd3P09027 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm9985-201ENSMUST00000044101 510 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm24610-201ENSMUST00000083270 109 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm24924-201ENSMUST00000084007 164 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.49□□□□□ -1.53
Hoxd3P09027 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC5.49□□□□□ -1.53
Hoxd3P09027 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hoxd3P09027 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms