Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Gm15171-201ENSMUST00000122191 334 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Gm24371-201ENSMUST00000122662 267 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Gm26153-201ENSMUST00000157433 127 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Gm9569-201ENSMUST00000187492 787 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Gm18426-201ENSMUST00000191874 973 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Gm43315-201ENSMUST00000198120 313 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Gm18850-201ENSMUST00000211578 388 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Mir30b-201ENSMUST00000083542 96 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Cx3cl1O35188 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.6□□□□□ -1.67
Cx3cl1O35188 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Cx3cl1O35188 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm11822-201ENSMUST00000119177 415 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm11759-201ENSMUST00000121742 464 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm13007-201ENSMUST00000121866 365 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm6647-201ENSMUST00000170514 641 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm18342-201ENSMUST00000186987 694 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm2427-201ENSMUST00000189121 881 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm6261-201ENSMUST00000204707 760 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm45157-201ENSMUST00000208729 401 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Desi2-202ENSMUST00000069568 1193 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Cx3cl1O35188 Gm25134-201ENSMUST00000082646 160 ntBASIC4.59□□□□□ -1.67
Cx3cl1O35188 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Cx3cl1O35188 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Cx3cl1O35188 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Cx3cl1O35188 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.59□□□□□ -1.68
Cx3cl1O35188 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Cx3cl1O35188 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.59□□□□□ -1.68
Cx3cl1O35188 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.58□□□□□ -1.68
Cx3cl1O35188 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.58□□□□□ -1.68
Cx3cl1O35188 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Cx3cl1O35188 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Cx3cl1O35188 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
Cx3cl1O35188 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Cx3cl1O35188 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.58□□□□□ -1.68
Cx3cl1O35188 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm13321-201ENSMUST00000117101 400 ntBASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm11409-201ENSMUST00000118621 403 ntBASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm11196-201ENSMUST00000119052 395 ntBASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm11742-201ENSMUST00000119903 233 ntBASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm12583-201ENSMUST00000120677 853 ntBASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm23855-201ENSMUST00000158377 135 ntBASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm5511-201ENSMUST00000189380 802 ntBASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm10292-202ENSMUST00000193165 585 ntBASIC4.58□□□□□ -1.68
Cx3cl1O35188 Gm17775-201ENSMUST00000198542 258 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms