Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Gm4541-201ENSMUST00000208901 1848 ntBASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Mir3104-201ENSMUST00000174911 63 ntBASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Gm13249-201ENSMUST00000177803 345 ntBASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Gm13144-201ENSMUST00000179385 345 ntBASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Gm18258-201ENSMUST00000210413 542 ntBASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 AC154198.1-201ENSMUST00000222839 424 ntBASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Gm23875-201ENSMUST00000083711 318 ntBASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.84□□□□□ -0.99
Ccdc180J3QNE4 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Ccdc180J3QNE4 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Gm22758-201ENSMUST00000102275 96 ntBASIC8.83□□□□□ -1
Ccdc180J3QNE4 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 AC165092.2-201ENSMUST00000224681 368 ntBASIC8.83□□□□□ -1
Ccdc180J3QNE4 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Apoo-ps-201ENSMUST00000061241 586 ntBASIC8.83□□□□□ -1
Ccdc180J3QNE4 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Gm3962-201ENSMUST00000173027 2587 ntBASIC8.83□□□□□ -1
Ccdc180J3QNE4 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Ccdc180J3QNE4 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc180J3QNE4 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc180J3QNE4 Gm37357-201ENSMUST00000192386 3123 ntBASIC8.82□□□□□ -1
Ccdc180J3QNE4 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc180J3QNE4 Gm14854-201ENSMUST00000117758 841 ntBASIC8.82□□□□□ -1
Ccdc180J3QNE4 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC8.82□□□□□ -1
Ccdc180J3QNE4 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc180J3QNE4 Gm37123-201ENSMUST00000192994 1171 ntBASIC8.82□□□□□ -1
Ccdc180J3QNE4 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc180J3QNE4 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC8.82□□□□□ -1
Ccdc180J3QNE4 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Ccdc180J3QNE4 Gm37226-201ENSMUST00000191644 3255 ntBASIC8.82□□□□□ -1
Ccdc180J3QNE4 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ccdc180J3QNE4 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc180J3QNE4 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
Ccdc180J3QNE4 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.82□□□□□ -1
Ccdc180J3QNE4 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm15752-201ENSMUST00000117427 394 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm14753-201ENSMUST00000118503 246 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 AL589742.1-201ENSMUST00000226034 349 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm6065-201ENSMUST00000081336 492 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm6043-201ENSMUST00000099961 492 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm5155-201ENSMUST00000072381 2841 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm14628-201ENSMUST00000117508 635 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm12893-201ENSMUST00000121732 275 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm24507-201ENSMUST00000157683 134 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm4322-201ENSMUST00000191094 336 ntBASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc180J3QNE4 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm15182-201ENSMUST00000120832 1676 ntBASIC8.8□□□□□ -1
Ccdc180J3QNE4 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm22789-201ENSMUST00000157884 130 ntBASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm21816-201ENSMUST00000179255 360 ntBASIC8.8□□□□□ -1
Ccdc180J3QNE4 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms