Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm8358-201ENSMUST00000167222 555 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Mir6343-201ENSMUST00000183584 84 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Mir6400-201ENSMUST00000184870 92 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm37631-201ENSMUST00000192275 364 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm18036-201ENSMUST00000195256 272 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm44048-201ENSMUST00000204531 361 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm44585-201ENSMUST00000207150 607 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 AC153522.1-201ENSMUST00000220047 1090 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm7206-201ENSMUST00000117730 508 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm23964-201ENSMUST00000157966 107 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm26487-201ENSMUST00000158022 94 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm22261-201ENSMUST00000158691 324 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Samd15-201ENSMUST00000169669 1194 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm8669-201ENSMUST00000183839 945 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm43712-201ENSMUST00000198020 291 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm31532-201ENSMUST00000203555 767 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm44972-201ENSMUST00000206419 406 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm21041-201ENSMUST00000214829 823 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm25187-201ENSMUST00000083906 133 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Vps28Q9D1C8 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.37□□□□□ -1.55
Vps28Q9D1C8 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm12106-201ENSMUST00000116006 1200 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm25861-201ENSMUST00000158251 109 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm27820-201ENSMUST00000183628 175 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm29747-201ENSMUST00000194764 585 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm18325-201ENSMUST00000203228 835 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm19256-201ENSMUST00000218550 231 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Zfp429-203ENSMUST00000224684 524 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms