Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm7206-201ENSMUST00000117730 508 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm15480-201ENSMUST00000120442 519 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm25290-201ENSMUST00000122796 144 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm23121-201ENSMUST00000157653 173 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm43444-201ENSMUST00000198123 291 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm18127-201ENSMUST00000208479 725 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm6362-201ENSMUST00000217686 836 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm22741-201ENSMUST00000083438 165 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Mir27a-201ENSMUST00000083510 87 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Smc1aQ9CU62 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm14788-201ENSMUST00000119457 375 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm13532-201ENSMUST00000120373 240 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm17152-201ENSMUST00000172430 535 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Supt4b-201ENSMUST00000214434 351 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Mir17-201ENSMUST00000083574 84 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.67□□□□□ -1.5
Smc1aQ9CU62 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms