Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm29550-201ENSMUST00000185543 285 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm42886-201ENSMUST00000199214 466 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm18597-201ENSMUST00000209519 694 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm8523-201ENSMUST00000211386 552 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 AC122393.1-201ENSMUST00000226570 319 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 AC115735.3-201ENSMUST00000227757 513 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm6776-201ENSMUST00000057752 900 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm10221-201ENSMUST00000088299 309 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Clrn1Q8K445 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Clrn1Q8K445 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.49□□□□□ -1.53
Clrn1Q8K445 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm12193-201ENSMUST00000117250 379 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm12994-201ENSMUST00000119601 447 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm15791-201ENSMUST00000120365 319 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm14679-201ENSMUST00000121536 722 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm12494-201ENSMUST00000121684 521 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm14162-201ENSMUST00000121985 601 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm15840-201ENSMUST00000122099 943 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm23792-201ENSMUST00000122557 93 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm7316-201ENSMUST00000165395 445 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm22655-201ENSMUST00000174949 96 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Mir7082-201ENSMUST00000183526 92 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm27158-201ENSMUST00000183813 238 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Mir6244-201ENSMUST00000184156 117 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm43779-201ENSMUST00000196691 829 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm43171-201ENSMUST00000199882 291 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm43578-201ENSMUST00000201250 459 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm44219-201ENSMUST00000203005 273 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm19196-201ENSMUST00000209258 357 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.48□□□□□ -1.53
Clrn1Q8K445 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm18557-201ENSMUST00000218710 433 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 Gm6068-201ENSMUST00000222270 387 ntBASIC5.48□□□□□ -1.53
Clrn1Q8K445 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms