Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm11447-201ENSMUST00000118983 858 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm11357-201ENSMUST00000119758 954 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm13367-201ENSMUST00000119955 796 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm17377-201ENSMUST00000165184 207 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm26925-201ENSMUST00000182470 957 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm29600-201ENSMUST00000188687 377 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm43408-201ENSMUST00000198263 440 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm19104-201ENSMUST00000198392 679 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm44214-201ENSMUST00000204153 606 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm46103-201ENSMUST00000217614 341 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm2099-201ENSMUST00000220979 412 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 AC163621.2-201ENSMUST00000222229 682 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 AC122393.1-201ENSMUST00000226570 319 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 AC110380.1-201ENSMUST00000226987 389 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm24763-201ENSMUST00000083688 190 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm43113-201ENSMUST00000199713 1754 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Gm5844-201ENSMUST00000119417 2191 ntBASIC7.35□□□□□ -1.23
Usp40Q8BWR4 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm43211-201ENSMUST00000196901 1899 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm42781-201ENSMUST00000201317 2719 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm25418-201ENSMUST00000104214 129 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm17014-201ENSMUST00000120765 168 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm22600-201ENSMUST00000157598 269 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm3053-201ENSMUST00000161709 616 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm29073-201ENSMUST00000185563 664 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm29165-201ENSMUST00000190655 664 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm29211-201ENSMUST00000191470 664 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm38261-201ENSMUST00000192608 316 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm42814-201ENSMUST00000199370 460 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm5457-201ENSMUST00000022260 333 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 CT030662.1-201ENSMUST00000227380 232 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 AC165437.1-201ENSMUST00000228640 536 ntBASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC7.34□□□□□ -1.23
Usp40Q8BWR4 Gm43333-201ENSMUST00000198340 2262 ntBASIC7.34□□□□□ -1.24
Usp40Q8BWR4 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
Usp40Q8BWR4 Gm43891-201ENSMUST00000205132 3112 ntBASIC7.34□□□□□ -1.24
Usp40Q8BWR4 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm43469-201ENSMUST00000196084 4634 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm42702-201ENSMUST00000199515 4217 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm24142-201ENSMUST00000101960 107 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm22468-201ENSMUST00000116680 120 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm26248-201ENSMUST00000116700 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm26137-201ENSMUST00000116701 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm26190-201ENSMUST00000116704 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm24617-201ENSMUST00000116705 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm25778-201ENSMUST00000116713 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm25774-201ENSMUST00000116717 121 ntBASIC7.33□□□□□ -1.24
Usp40Q8BWR4 Gm22102-201ENSMUST00000116730 121 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms