Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm6195-201ENSMUST00000063059 357 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
Ccdc40Q8BI79 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm24541-201ENSMUST00000103871 96 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm3943-201ENSMUST00000118606 718 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm14560-201ENSMUST00000118672 375 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm16456-201ENSMUST00000174431 920 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm27854-201ENSMUST00000175578 244 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm23450-201ENSMUST00000178285 91 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28353-201ENSMUST00000186482 570 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28604-201ENSMUST00000186629 484 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28566-201ENSMUST00000186714 484 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28533-201ENSMUST00000186741 570 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28194-201ENSMUST00000187412 484 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28886-202ENSMUST00000187889 484 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29281-201ENSMUST00000188077 381 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28554-202ENSMUST00000189175 484 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29213-202ENSMUST00000189703 484 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28851-202ENSMUST00000189757 484 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28461-201ENSMUST00000190023 484 ntBASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ccdc40Q8BI79 Gm37837-201ENSMUST00000191743 604 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms