Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm23211-201ENSMUST00000122717 308 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm24186-201ENSMUST00000157983 127 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm22210-201ENSMUST00000158101 144 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm27030-201ENSMUST00000182551 464 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm27155-201ENSMUST00000183716 898 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Mir6244-201ENSMUST00000184156 117 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm5511-201ENSMUST00000189380 802 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm31123-201ENSMUST00000192094 666 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm4742-201ENSMUST00000200261 771 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm44214-201ENSMUST00000204153 606 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm3333-202ENSMUST00000221763 1044 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 AC164297.5-201ENSMUST00000224365 198 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 CT030684.2-201ENSMUST00000228946 826 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm16335-201ENSMUST00000077495 309 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Mir298-201ENSMUST00000083476 82 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Sp140Q6NSQ5 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm4596-201ENSMUST00000117197 442 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm12889-201ENSMUST00000118684 241 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm11737-201ENSMUST00000118713 468 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm26372-201ENSMUST00000157831 236 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm3216-201ENSMUST00000166927 486 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm3141-201ENSMUST00000168726 499 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm2930-201ENSMUST00000170403 474 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm8604-201ENSMUST00000183150 965 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm37503-201ENSMUST00000192088 319 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm42522-201ENSMUST00000196071 255 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm44727-201ENSMUST00000204225 451 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm44138-201ENSMUST00000204939 271 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm38574-201ENSMUST00000211855 640 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm19137-201ENSMUST00000213790 1164 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 AC115047.1-201ENSMUST00000213795 322 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Gm4510-201ENSMUST00000218265 427 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 AC122937.1-201ENSMUST00000226405 793 ntBASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Sp140Q6NSQ5 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms