Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Ccdc88aQ5SNZ0 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.65□□□□□ -1.51
Ccdc88aQ5SNZ0 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm16463-201ENSMUST00000120527 721 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm13232-201ENSMUST00000121816 632 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm37636-201ENSMUST00000193583 359 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Zfp389-201ENSMUST00000118425 675 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm12717-201ENSMUST00000118427 983 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm16107-201ENSMUST00000162523 862 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm19124-201ENSMUST00000191041 832 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm33626-201ENSMUST00000206790 828 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Naip3-201ENSMUST00000118082 4208 ntBASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc88aQ5SNZ0 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm23481-201ENSMUST00000104173 131 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm11409-201ENSMUST00000118621 403 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm15206-201ENSMUST00000119143 454 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm13132-201ENSMUST00000121194 472 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm13973-201ENSMUST00000121371 894 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm22819-201ENSMUST00000157445 303 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm22395-201ENSMUST00000177427 96 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm29664-201ENSMUST00000191125 463 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm18482-201ENSMUST00000202405 760 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc88aQ5SNZ0 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms