Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm22596-201ENSMUST00000157601 316 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm23259-201ENSMUST00000158318 303 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm22158-201ENSMUST00000158411 126 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm21737-201ENSMUST00000178112 664 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm21815-201ENSMUST00000178213 664 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm20874-201ENSMUST00000178356 663 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm21744-201ENSMUST00000178403 662 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm22420-201ENSMUST00000178795 126 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm20901-201ENSMUST00000180177 664 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm27044-201ENSMUST00000183033 796 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm28017-201ENSMUST00000183434 126 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm28008-201ENSMUST00000184021 186 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Mir6362-201ENSMUST00000184329 107 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm27964-201ENSMUST00000185195 62 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm29216-201ENSMUST00000187117 492 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm28090-201ENSMUST00000189458 664 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm21647-201ENSMUST00000189755 664 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm7626-201ENSMUST00000195801 353 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm44058-201ENSMUST00000204335 467 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm44952-201ENSMUST00000204443 433 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm44910-201ENSMUST00000208451 396 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 AC166358.3-201ENSMUST00000221456 181 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 AC160114.1-201ENSMUST00000221930 365 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm6474-201ENSMUST00000223250 699 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 CT009713.9-201ENSMUST00000223604 389 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Col8a1Q00780 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 AC165106.1-201ENSMUST00000227580 408 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm16415-201ENSMUST00000080097 489 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm5185-201ENSMUST00000080271 619 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.28□□□□□ -1.56
Col8a1Q00780 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col8a1Q00780 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col8a1Q00780 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm43876-201ENSMUST00000203831 3229 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col8a1Q00780 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm23942-201ENSMUST00000101956 107 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Mir1188-201ENSMUST00000116756 120 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm12641-201ENSMUST00000117874 985 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm15095-201ENSMUST00000118996 1430 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm14294-201ENSMUST00000119749 751 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm12807-201ENSMUST00000121546 962 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm13555-201ENSMUST00000121668 319 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm9785-202ENSMUST00000144563 593 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC5.27□□□□□ -1.57
Col8a1Q00780 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm22841-201ENSMUST00000158443 62 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm8256-201ENSMUST00000169178 453 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm5139-201ENSMUST00000175943 249 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm27762-201ENSMUST00000183417 109 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm19089-201ENSMUST00000197207 613 ntBASIC5.27□□□□□ -1.57
Col8a1Q00780 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms