Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HttP42859 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
HttP42859 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HttP42859 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.92□□□□□ -1.62
HttP42859 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.92□□□□□ -1.62
HttP42859 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC4.92□□□□□ -1.62
HttP42859 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.92□□□□□ -1.62
HttP42859 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.92□□□□□ -1.62
HttP42859 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.92□□□□□ -1.62
HttP42859 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HttP42859 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HttP42859 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HttP42859 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Gm13081-201ENSMUST00000121527 5599 ntBASIC4.91□□□□□ -1.62
HttP42859 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 AC107645.1-201ENSMUST00000228660 1810 ntBASIC4.91□□□□□ -1.62
HttP42859 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.91□□□□□ -1.62
HttP42859 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.91□□□□□ -1.62
HttP42859 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HttP42859 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.91□□□□□ -1.62
HttP42859 Gm36964-201ENSMUST00000191876 198 ntBASIC4.91□□□□□ -1.62
HttP42859 Gm18120-201ENSMUST00000220079 511 ntBASIC4.91□□□□□ -1.62
HttP42859 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HttP42859 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HttP42859 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.91□□□□□ -1.62
HttP42859 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC4.91□□□□□ -1.62
HttP42859 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HttP42859 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
HttP42859 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Gm37183-201ENSMUST00000191712 3405 ntBASIC4.91□□□□□ -1.62
HttP42859 Gm25438-201ENSMUST00000158281 110 ntBASIC4.91□□□□□ -1.62
HttP42859 Mir6345-201ENSMUST00000184286 128 ntBASIC4.91□□□□□ -1.62
HttP42859 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC4.91□□□□□ -1.62
HttP42859 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC4.91□□□□□ -1.62
HttP42859 Gm5284-201ENSMUST00000199053 903 ntBASIC4.91□□□□□ -1.62
HttP42859 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HttP42859 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
HttP42859 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HttP42859 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.91□□□□□ -1.62
HttP42859 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HttP42859 AC174797.5-201ENSMUST00000225055 1860 ntBASIC4.91□□□□□ -1.62
HttP42859 Gm4540-201ENSMUST00000170669 429 ntBASIC4.9□□□□□ -1.62
HttP42859 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HttP42859 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
HttP42859 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.9□□□□□ -1.62
HttP42859 Gm29452-201ENSMUST00000187996 313 ntBASIC4.9□□□□□ -1.62
HttP42859 Gm28860-201ENSMUST00000188103 313 ntBASIC4.9□□□□□ -1.62
HttP42859 Gm28428-201ENSMUST00000188886 697 ntBASIC4.9□□□□□ -1.62
HttP42859 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.9□□□□□ -1.62
HttP42859 Gm45796-201ENSMUST00000212483 114 ntBASIC4.9□□□□□ -1.62
HttP42859 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC4.9□□□□□ -1.62
HttP42859 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HttP42859 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HttP42859 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.9□□□□□ -1.62
HttP42859 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HttP42859 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.9□□□□□ -1.62
HttP42859 Gm43953-201ENSMUST00000203709 2867 ntBASIC4.9□□□□□ -1.62
HttP42859 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HttP42859 Gm10513-201ENSMUST00000194203 6468 ntBASIC4.9□□□□□ -1.62
HttP42859 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HttP42859 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HttP42859 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HttP42859 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HttP42859 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HttP42859 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.9□□□□□ -1.63
HttP42859 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HttP42859 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HttP42859 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
HttP42859 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.9□□□□□ -1.63
HttP42859 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HttP42859 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HttP42859 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
HttP42859 Gm43853-201ENSMUST00000197162 301 ntBASIC4.9□□□□□ -1.63
HttP42859 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.9□□□□□ -1.63
HttP42859 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HttP42859 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HttP42859 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HttP42859 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HttP42859 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC4.9□□□□□ -1.63
HttP42859 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HttP42859 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HttP42859 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HttP42859 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
HttP42859 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms