Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.66□□□□□ -1.66
Sox6P40645 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC4.66□□□□□ -1.66
Sox6P40645 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.66□□□□□ -1.66
Sox6P40645 Gm38166-201ENSMUST00000191660 471 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Gm43596-201ENSMUST00000202818 884 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Gm18215-201ENSMUST00000204429 798 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.66□□□□□ -1.66
Sox6P40645 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.66□□□□□ -1.66
Sox6P40645 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 Gm21041-201ENSMUST00000214829 823 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Gm5750-201ENSMUST00000218711 801 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 AV026068-231ENSMUST00000225862 482 ntBASIC4.66□□□□□ -1.66
Sox6P40645 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 AC153959.1-201ENSMUST00000213617 1694 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sox6P40645 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.66□□□□□ -1.66
Sox6P40645 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Sox6P40645 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.65□□□□□ -1.66
Sox6P40645 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.65□□□□□ -1.66
Sox6P40645 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Sox6P40645 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
Sox6P40645 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.65□□□□□ -1.66
Sox6P40645 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Sox6P40645 Gm14086-201ENSMUST00000117152 173 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm4853-201ENSMUST00000119359 394 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm13489-201ENSMUST00000121234 971 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm12422-201ENSMUST00000121431 302 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm5699-201ENSMUST00000152491 723 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm23993-201ENSMUST00000157478 144 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm23902-201ENSMUST00000157571 134 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm22383-201ENSMUST00000158188 327 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm26354-201ENSMUST00000158221 129 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm26404-201ENSMUST00000158498 109 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.65□□□□□ -1.67
Sox6P40645 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
Sox6P40645 Gm3307-201ENSMUST00000176164 632 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Sox6P40645 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sox6P40645 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC4.65□□□□□ -1.67
Sox6P40645 Gm29484-201ENSMUST00000186067 324 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm6075-201ENSMUST00000186816 486 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Sox6P40645 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sox6P40645 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sox6P40645 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC4.65□□□□□ -1.67
Sox6P40645 Gm4321-201ENSMUST00000200520 442 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm17984-201ENSMUST00000205286 859 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Gm33601-201ENSMUST00000210001 961 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Sox6P40645 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.65□□□□□ -1.67
Sox6P40645 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.65□□□□□ -1.67
Sox6P40645 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sox6P40645 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sox6P40645 Gm24525-201ENSMUST00000082917 151 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sox6P40645 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Sox6P40645 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Sox6P40645 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.65□□□□□ -1.67
Sox6P40645 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.65□□□□□ -1.67
Sox6P40645 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sox6P40645 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sox6P40645 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.64□□□□□ -1.67
Sox6P40645 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sox6P40645 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Sox6P40645 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.64□□□□□ -1.67
Sox6P40645 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.64□□□□□ -1.67
Sox6P40645 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sox6P40645 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Sox6P40645 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sox6P40645 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sox6P40645 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Sox6P40645 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Sox6P40645 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.64□□□□□ -1.67
Sox6P40645 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sox6P40645 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Sox6P40645 Gm13033-201ENSMUST00000117591 1057 ntBASIC4.64□□□□□ -1.67
Sox6P40645 Gm7657-201ENSMUST00000118851 666 ntBASIC4.64□□□□□ -1.67
Sox6P40645 Gm4342-201ENSMUST00000118982 367 ntBASIC4.64□□□□□ -1.67
Sox6P40645 Gm14791-201ENSMUST00000119061 1166 ntBASIC4.64□□□□□ -1.67
Sox6P40645 Gm13367-201ENSMUST00000119955 796 ntBASIC4.64□□□□□ -1.67
Sox6P40645 Gm9085-201ENSMUST00000119994 1072 ntBASIC4.64□□□□□ -1.67
Sox6P40645 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.64□□□□□ -1.67
Sox6P40645 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.64□□□□□ -1.67
Sox6P40645 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Sox6P40645 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sox6P40645 Gm11507-201ENSMUST00000156462 412 ntBASIC4.64□□□□□ -1.67
Sox6P40645 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms