Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.97□□□□□ -1.45
Traf1P39428 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Traf1P39428 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Traf1P39428 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Traf1P39428 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Traf1P39428 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Traf1P39428 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Traf1P39428 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.97□□□□□ -1.45
Traf1P39428 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.45
Traf1P39428 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Traf1P39428 Gm44286-201ENSMUST00000204098 1487 ntBASIC5.96□□□□□ -1.45
Traf1P39428 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Traf1P39428 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.96□□□□□ -1.45
Traf1P39428 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Traf1P39428 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Traf1P39428 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Traf1P39428 Gm12638-201ENSMUST00000119531 298 ntBASIC5.96□□□□□ -1.46
Traf1P39428 Gm4910-201ENSMUST00000119605 366 ntBASIC5.96□□□□□ -1.46
Traf1P39428 Gm7973-201ENSMUST00000122107 488 ntBASIC5.96□□□□□ -1.46
Traf1P39428 Gm25179-201ENSMUST00000122632 128 ntBASIC5.96□□□□□ -1.46
Traf1P39428 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.96□□□□□ -1.46
Traf1P39428 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Traf1P39428 Gm23902-201ENSMUST00000157571 134 ntBASIC5.96□□□□□ -1.46
Traf1P39428 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.96□□□□□ -1.46
Traf1P39428 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Traf1P39428 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Traf1P39428 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Traf1P39428 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Traf1P39428 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Traf1P39428 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.96□□□□□ -1.46
Traf1P39428 Gm2147-201ENSMUST00000193588 639 ntBASIC5.96□□□□□ -1.46
Traf1P39428 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.96□□□□□ -1.46
Traf1P39428 Gm43768-201ENSMUST00000198380 1258 ntBASIC5.96□□□□□ -1.46
Traf1P39428 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.96□□□□□ -1.46
Traf1P39428 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Traf1P39428 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.96□□□□□ -1.46
Traf1P39428 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.96□□□□□ -1.46
Traf1P39428 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.96□□□□□ -1.46
Traf1P39428 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.96□□□□□ -1.46
Traf1P39428 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.96□□□□□ -1.46
Traf1P39428 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.96□□□□□ -1.46
Traf1P39428 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Traf1P39428 Mir17-201ENSMUST00000083574 84 ntBASIC5.96□□□□□ -1.46
Traf1P39428 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.96□□□□□ -1.46
Traf1P39428 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Traf1P39428 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Traf1P39428 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Traf1P39428 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Traf1P39428 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.96□□□□□ -1.46
Traf1P39428 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Traf1P39428 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
Traf1P39428 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Traf1P39428 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Traf1P39428 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Traf1P39428 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 Gm15171-201ENSMUST00000122191 334 ntBASIC5.95□□□□□ -1.46
Traf1P39428 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.95□□□□□ -1.46
Traf1P39428 Gm26310-201ENSMUST00000157766 117 ntBASIC5.95□□□□□ -1.46
Traf1P39428 Mir5112-201ENSMUST00000174897 60 ntBASIC5.95□□□□□ -1.46
Traf1P39428 Mir5103-201ENSMUST00000175111 79 ntBASIC5.95□□□□□ -1.46
Traf1P39428 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Traf1P39428 Gm27039-201ENSMUST00000182438 962 ntBASIC5.95□□□□□ -1.46
Traf1P39428 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.95□□□□□ -1.46
Traf1P39428 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 Gm37700-201ENSMUST00000192617 965 ntBASIC5.95□□□□□ -1.46
Traf1P39428 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.95□□□□□ -1.46
Traf1P39428 Gm2623-201ENSMUST00000199229 286 ntBASIC5.95□□□□□ -1.46
Traf1P39428 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.95□□□□□ -1.46
Traf1P39428 Gm9038-201ENSMUST00000203400 604 ntBASIC5.95□□□□□ -1.46
Traf1P39428 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 Gm19201-201ENSMUST00000210127 778 ntBASIC5.95□□□□□ -1.46
Traf1P39428 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.95□□□□□ -1.46
Traf1P39428 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Traf1P39428 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Traf1P39428 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Traf1P39428 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.95□□□□□ -1.46
Traf1P39428 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.95□□□□□ -1.46
Traf1P39428 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Traf1P39428 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Traf1P39428 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Traf1P39428 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Traf1P39428 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Traf1P39428 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.94□□□□□ -1.46
Traf1P39428 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Traf1P39428 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Traf1P39428 Gm11346-201ENSMUST00000118346 704 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Gm14957-201ENSMUST00000121069 817 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Gm16254-201ENSMUST00000131528 730 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms