Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm25598-201ENSMUST00000179031 107 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hoxc11P31313 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxc11P31313 Mir6903-201ENSMUST00000183597 88 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm29281-201ENSMUST00000188077 381 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm18553-201ENSMUST00000194152 634 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm44300-201ENSMUST00000196792 121 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm8891-201ENSMUST00000198546 832 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm19617-201ENSMUST00000202977 308 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm44023-201ENSMUST00000203710 469 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm44332-201ENSMUST00000203712 433 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm44857-201ENSMUST00000208331 196 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxc11P31313 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hoxc11P31313 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxc11P31313 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxc11P31313 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Hoxc11P31313 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.3□□□□□ -1.56
Hoxc11P31313 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.3□□□□□ -1.56
Hoxc11P31313 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm42479-201ENSMUST00000198654 1356 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm13488-201ENSMUST00000120419 179 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm11677-201ENSMUST00000121349 977 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm11894-201ENSMUST00000121579 328 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm3170-201ENSMUST00000168753 850 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm3348-201ENSMUST00000177813 850 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm8321-201ENSMUST00000181691 980 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm4832-201ENSMUST00000182679 399 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Mir6238-201ENSMUST00000184140 129 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm18036-201ENSMUST00000195256 272 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm42437-201ENSMUST00000197263 923 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm43712-201ENSMUST00000198020 291 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm9373-201ENSMUST00000208724 599 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 AC131743.3-201ENSMUST00000222099 662 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 AC159242.1-201ENSMUST00000225832 194 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 AC107663.3-201ENSMUST00000225873 601 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Clec2j-201ENSMUST00000032517 515 ntBASIC5.29□□□□□ -1.56
Hoxc11P31313 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Hoxc11P31313 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Hoxc11P31313 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.28□□□□□ -1.56
Hoxc11P31313 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxc11P31313 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms