Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm7181-201ENSMUST00000202197 434 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm44059-201ENSMUST00000204048 351 ntBASIC5.19□□□□□ -1.58
Lire1P11260 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.19□□□□□ -1.58
Lire1P11260 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm18387-201ENSMUST00000220333 702 ntBASIC5.19□□□□□ -1.58
Lire1P11260 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.19□□□□□ -1.58
Lire1P11260 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.19□□□□□ -1.58
Lire1P11260 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.19□□□□□ -1.58
Lire1P11260 AC154548.1-201ENSMUST00000225844 3838 ntBASIC5.19□□□□□ -1.58
Lire1P11260 CT030254.3-201ENSMUST00000225959 1231 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Gm8412-201ENSMUST00000077493 440 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Lire1P11260 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 AC163296.2-201ENSMUST00000220177 1315 ntBASIC5.19□□□□□ -1.58
Lire1P11260 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Lire1P11260 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Lire1P11260 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Lire1P11260 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
Lire1P11260 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.18□□□□□ -1.58
Lire1P11260 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Lire1P11260 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lire1P11260 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lire1P11260 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lire1P11260 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Lire1P11260 Gm24230-201ENSMUST00000104313 129 ntBASIC5.18□□□□□ -1.58
Lire1P11260 Gm11408-201ENSMUST00000117889 519 ntBASIC5.18□□□□□ -1.58
Lire1P11260 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.18□□□□□ -1.58
Lire1P11260 Gm14783-201ENSMUST00000118900 663 ntBASIC5.18□□□□□ -1.58
Lire1P11260 Gm12988-201ENSMUST00000119054 478 ntBASIC5.18□□□□□ -1.58
Lire1P11260 Gm6565-201ENSMUST00000121217 438 ntBASIC5.18□□□□□ -1.58
Lire1P11260 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms