Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm14428-201ENSMUST00000120408 822 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm12815-201ENSMUST00000121737 135 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm24289-201ENSMUST00000157629 135 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm26183-201ENSMUST00000157685 139 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Mir1930-201ENSMUST00000158799 84 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm22533-201ENSMUST00000158821 274 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm17212-201ENSMUST00000166666 259 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm8357-201ENSMUST00000181115 1011 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Mir6241-201ENSMUST00000184225 103 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm18117-201ENSMUST00000187720 742 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm29383-201ENSMUST00000188284 480 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm28717-201ENSMUST00000189950 315 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm29262-201ENSMUST00000190084 196 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm44083-201ENSMUST00000203114 337 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm8058-201ENSMUST00000217247 587 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 AC131795.1-201ENSMUST00000219632 426 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd3P09027 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm46389-201ENSMUST00000223199 392 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 AC108947.1-201ENSMUST00000224274 1000 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 AC187103.4-201ENSMUST00000225399 300 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 CT009556.4-201ENSMUST00000227092 200 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm23734-201ENSMUST00000083753 109 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm37906-201ENSMUST00000192050 3035 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.51□□□□□ -1.53
Hoxd3P09027 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
Hoxd3P09027 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hoxd3P09027 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd3P09027 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm10650-202ENSMUST00000196581 1969 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm25498-201ENSMUST00000104424 129 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm15203-201ENSMUST00000117668 455 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm14933-201ENSMUST00000118840 481 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm22024-201ENSMUST00000122733 287 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 n-R5s87-201ENSMUST00000122752 116 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm8289-201ENSMUST00000144814 1182 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm16113-201ENSMUST00000159629 372 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Mir6413-201ENSMUST00000184049 108 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm29784-201ENSMUST00000196217 406 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm42883-201ENSMUST00000202594 222 ntBASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC5.5□□□□□ -1.53
Hoxd3P09027 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms