Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm43968-201ENSMUST00000203388 389 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cldn5O54942 Gm18193-201ENSMUST00000210017 772 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Gm21112-201ENSMUST00000212224 578 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Gm7760-201ENSMUST00000212265 578 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Gm7807-201ENSMUST00000212475 578 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Gm6906-201ENSMUST00000218014 569 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 AC165437.1-201ENSMUST00000228640 536 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Cldn5O54942 Gm23626-201ENSMUST00000082458 133 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cldn5O54942 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cldn5O54942 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Cldn5O54942 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cldn5O54942 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Cldn5O54942 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Cldn5O54942 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Cldn5O54942 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.22□□□□□ -1.57
Cldn5O54942 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.22□□□□□ -1.57
Cldn5O54942 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Cldn5O54942 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.21□□□□□ -1.57
Cldn5O54942 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cldn5O54942 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Cldn5O54942 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Cldn5O54942 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cldn5O54942 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cldn5O54942 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cldn5O54942 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cldn5O54942 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Cldn5O54942 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Cldn5O54942 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Cldn5O54942 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.21□□□□□ -1.58
Cldn5O54942 Gm12285-201ENSMUST00000117347 233 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.21□□□□□ -1.58
Cldn5O54942 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cldn5O54942 Gm17081-201ENSMUST00000167363 478 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Cldn5O54942 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cldn5O54942 Gm20056-201ENSMUST00000194813 519 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 Gm43136-201ENSMUST00000200403 636 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 Gm43919-201ENSMUST00000204303 364 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 Gm8999-201ENSMUST00000204951 969 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.21□□□□□ -1.58
Cldn5O54942 Gm44869-201ENSMUST00000208836 357 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Cldn5O54942 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Cldn5O54942 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cldn5O54942 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cldn5O54942 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Cldn5O54942 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Cldn5O54942 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Cldn5O54942 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.21□□□□□ -1.58
Cldn5O54942 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cldn5O54942 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Cldn5O54942 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Cldn5O54942 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Cldn5O54942 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.21□□□□□ -1.58
Cldn5O54942 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Cldn5O54942 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cldn5O54942 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cldn5O54942 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Cldn5O54942 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm24142-201ENSMUST00000101960 107 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Cldn5O54942 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm14885-201ENSMUST00000117969 496 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm8145-201ENSMUST00000118220 745 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm15034-201ENSMUST00000120043 349 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm16463-201ENSMUST00000120527 721 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.2□□□□□ -1.58
Cldn5O54942 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cldn5O54942 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm42625-201ENSMUST00000198611 922 ntBASIC5.2□□□□□ -1.58
Cldn5O54942 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.2□□□□□ -1.58
Cldn5O54942 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 158.8 ms