Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28604-201ENSMUST00000186629 484 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28566-201ENSMUST00000186714 484 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28194-201ENSMUST00000187412 484 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28886-202ENSMUST00000187889 484 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28554-202ENSMUST00000189175 484 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29213-202ENSMUST00000189703 484 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28851-202ENSMUST00000189757 484 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28461-201ENSMUST00000190023 484 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28188-201ENSMUST00000190483 236 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm36983-201ENSMUST00000192280 1102 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm37908-201ENSMUST00000195828 470 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm2623-201ENSMUST00000199229 286 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm4742-201ENSMUST00000200261 771 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm43456-201ENSMUST00000202519 457 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm19596-201ENSMUST00000203685 739 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm44422-201ENSMUST00000204142 1025 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm17984-201ENSMUST00000205286 859 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm44779-201ENSMUST00000206937 708 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm45498-201ENSMUST00000210346 283 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC3.9□□□□□ -1.79
Hmgb3O54879 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 AC164295.2-201ENSMUST00000228539 757 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm10064-201ENSMUST00000071235 399 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hmgb3O54879 Mir504-201ENSMUST00000093602 79 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Hmgb3O54879 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm29084-201ENSMUST00000185587 1452 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC3.9□□□□□ -1.79
Hmgb3O54879 AC158388.2-201ENSMUST00000223665 1314 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 AC144772.3-201ENSMUST00000228829 3126 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm37470-201ENSMUST00000193378 2798 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb3O54879 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms