Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm43771-201ENSMUST00000202931 1578 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Col6a4A2AX52 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm12897-201ENSMUST00000120341 250 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm22637-201ENSMUST00000158144 283 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm22326-201ENSMUST00000158897 351 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm38053-201ENSMUST00000193938 160 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm45008-201ENSMUST00000206420 493 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm6988-201ENSMUST00000222676 375 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm37902-201ENSMUST00000192839 1683 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col6a4A2AX52 AC154354.1-201ENSMUST00000224585 2109 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm15583-201ENSMUST00000116191 3510 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.06□□□□□ -1.76
Col6a4A2AX52 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm45762-201ENSMUST00000212863 2619 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm1966-201ENSMUST00000184540 7293 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm37356-201ENSMUST00000193362 1613 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm10552-201ENSMUST00000113396 372 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm22986-201ENSMUST00000122753 130 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm5338-201ENSMUST00000209530 639 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm42819-201ENSMUST00000199630 5121 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm11698-201ENSMUST00000117948 455 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Gm45628-201ENSMUST00000210849 274 ntBASIC4.05□□□□□ -1.76
Col6a4A2AX52 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col6a4A2AX52 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm16394-201ENSMUST00000117289 675 ntBASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm13220-201ENSMUST00000121535 508 ntBASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm16107-201ENSMUST00000162523 862 ntBASIC4.04□□□□□ -1.76
Col6a4A2AX52 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm37495-201ENSMUST00000194590 264 ntBASIC4.04□□□□□ -1.76
Col6a4A2AX52 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm2522-201ENSMUST00000204280 322 ntBASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm45081-201ENSMUST00000206281 572 ntBASIC4.04□□□□□ -1.76
Col6a4A2AX52 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col6a4A2AX52 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.04□□□□□ -1.76
Col6a4A2AX52 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col6a4A2AX52 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms