Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Scn3aA2ASI5 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm23193-201ENSMUST00000102427 82 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm13195-201ENSMUST00000117229 261 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm15058-201ENSMUST00000117689 458 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm13484-201ENSMUST00000120738 412 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm24751-201ENSMUST00000157844 102 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm22726-201ENSMUST00000158089 179 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm27564-201ENSMUST00000185196 96 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm5284-201ENSMUST00000199053 903 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm24774-201ENSMUST00000157384 134 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm27158-201ENSMUST00000183813 238 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Gm28941-201ENSMUST00000185536 1017 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Scn3aA2ASI5 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.34□□□□□ -1.55
Scn3aA2ASI5 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.34□□□□□ -1.55
Scn3aA2ASI5 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.34□□□□□ -1.56
Scn3aA2ASI5 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.34□□□□□ -1.56
Scn3aA2ASI5 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Scn3aA2ASI5 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm12190-201ENSMUST00000120001 187 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm6155-201ENSMUST00000173735 341 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm37878-201ENSMUST00000192108 387 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm44816-201ENSMUST00000206666 477 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms