Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm11507-201ENSMUST00000156462 412 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm24186-201ENSMUST00000157983 127 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm20545-201ENSMUST00000174739 210 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm5139-201ENSMUST00000175943 249 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm10784-201ENSMUST00000178715 238 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm8993-201ENSMUST00000182182 983 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm29525-201ENSMUST00000189844 699 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm19029-201ENSMUST00000189923 564 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm29523-201ENSMUST00000191415 699 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm42542-201ENSMUST00000197978 268 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Mir142-201ENSMUST00000198092 64 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm44656-201ENSMUST00000208428 490 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Gm18387-201ENSMUST00000220333 702 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 AC192088.2-201ENSMUST00000227590 411 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Snord59a-201ENSMUST00000082844 74 ntBASIC5.4□□□□□ -1.54
Vps28Q9D1C8 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Vps28Q9D1C8 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.4□□□□□ -1.55
Vps28Q9D1C8 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Vps28Q9D1C8 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Vps28Q9D1C8 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Vps28Q9D1C8 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Vps28Q9D1C8 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
Vps28Q9D1C8 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC5.4□□□□□ -1.55
Vps28Q9D1C8 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.4□□□□□ -1.55
Vps28Q9D1C8 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
Vps28Q9D1C8 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm24429-201ENSMUST00000104076 132 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm24350-201ENSMUST00000104163 133 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm8475-201ENSMUST00000118211 526 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm11483-201ENSMUST00000119839 247 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm16571-201ENSMUST00000159112 291 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm10319-202ENSMUST00000159439 846 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm19200-201ENSMUST00000182579 1001 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm29454-201ENSMUST00000190805 393 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm18007-201ENSMUST00000205019 844 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm20586-201ENSMUST00000210122 547 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm18904-201ENSMUST00000218756 329 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Olfr844-201ENSMUST00000054106 930 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm9386-201ENSMUST00000095195 381 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Smc5-206ENSMUST00000226111 3265 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.39□□□□□ -1.55
Vps28Q9D1C8 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Vps28Q9D1C8 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Mir1188-201ENSMUST00000116756 120 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm12577-201ENSMUST00000119701 574 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.38□□□□□ -1.55
Vps28Q9D1C8 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms