Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gm12444-201ENSMUST00000121512 877 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gm6047-201ENSMUST00000167221 574 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gm20519-201ENSMUST00000173684 359 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Mir6374-201ENSMUST00000184003 107 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gm9173-201ENSMUST00000198054 400 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gm44919-201ENSMUST00000208587 1073 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gm21041-201ENSMUST00000214829 823 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 AC163621.2-201ENSMUST00000222229 682 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Mir342-201ENSMUST00000083502 99 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Smc1aQ9CU62 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm22272-201ENSMUST00000104039 134 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm15754-201ENSMUST00000119191 478 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm6717-201ENSMUST00000185549 838 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm37741-201ENSMUST00000191768 1256 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm44307-201ENSMUST00000204466 764 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm44776-201ENSMUST00000207212 381 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm5457-201ENSMUST00000022260 333 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm25139-201ENSMUST00000083247 210 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.7□□□□□ -1.5
Smc1aQ9CU62 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm13321-201ENSMUST00000117101 400 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm3931-201ENSMUST00000119038 455 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm26310-201ENSMUST00000157766 117 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm22857-201ENSMUST00000174969 134 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm8941-201ENSMUST00000181451 899 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm19029-201ENSMUST00000189923 564 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm42542-201ENSMUST00000197978 268 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm17775-201ENSMUST00000198542 258 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 AC147615.1-201ENSMUST00000218914 441 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Smc1aQ9CU62 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Gm24706-201ENSMUST00000082806 137 ntBASIC5.69□□□□□ -1.5
Smc1aQ9CU62 Snord15b-201ENSMUST00000083032 145 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms