Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Supt4b-201ENSMUST00000214434 351 ntBASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Nup88Q8CEC0 AC131100.2-201ENSMUST00000227701 998 ntBASIC5.93□□□□□ -1.46
Nup88Q8CEC0 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Nup88Q8CEC0 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm13195-201ENSMUST00000117229 261 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm16149-201ENSMUST00000117631 309 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm13787-201ENSMUST00000120422 168 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm12007-201ENSMUST00000120978 597 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm12422-201ENSMUST00000121431 302 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm23318-201ENSMUST00000158000 108 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm26925-201ENSMUST00000182470 957 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm28385-201ENSMUST00000185671 292 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm29036-201ENSMUST00000189967 877 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm45157-201ENSMUST00000208729 401 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm18924-201ENSMUST00000211929 316 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 CT030124.1-201ENSMUST00000217130 235 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Nup88Q8CEC0 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm24170-201ENSMUST00000104124 133 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm25418-201ENSMUST00000104214 129 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm4910-201ENSMUST00000119605 366 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm26404-201ENSMUST00000158498 109 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm42694-201ENSMUST00000196951 358 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm2645-201ENSMUST00000223516 547 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm24763-201ENSMUST00000083688 190 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.91□□□□□ -1.46
Nup88Q8CEC0 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Gm12641-201ENSMUST00000117874 985 ntBASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Gm11346-201ENSMUST00000118346 704 ntBASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Gm3267-201ENSMUST00000118671 473 ntBASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Gm11742-201ENSMUST00000119903 233 ntBASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.9□□□□□ -1.46
Nup88Q8CEC0 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms